Year 3 BEACON funding (press release)

Here is the press release for Year 3 BEACON funding to UI. Feel free to pass it along to your media friends!

UI Year 3 BEACON funding

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Student/Postdoc handbook

Reminder: we do have a BEACON handbook for potential and current students and postdocs. Here it is: BEACONStudentPostdocInfo2012

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NSF Site visit at BEACON Headquarters

Matt Pennell, Anne Guttman, and Daniel Beck and I just returned from an NSF Site Visit and external review at MSU. Presentations went well, reviewers were suitably impressed, and collaborations were deepened. It was good that we had student/postdoc representation (Thanks to Matt for setting that up).

Matt is now the UI representative on the grad/postdoc BEACON council. He has plans and ideas, which I’m sure he’ll share shortly.

The bottom line: the reviewers and NSF were very, very impressed.

Thanks, everyone, for being a great team!

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BEACON Year 3 proposals

The official call for proposals will be released Dec 12th, and they will be due around 15 January. Criteria will be much the same as last year. Collaborations with other BEACON institutions is likely to be even MORE important this year.

Get ready! Get set! …

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Friday IBEST/BEACON seminars

BEACON seminars are every Friday at 12.30 in LSS 144, with participants from UI, UT, UW, MSU, and NCA&T. Topics vary from week to week. Sometimes they are regular science seminars, sometimes introductions to potential collaborators’ research areas. These are a good way to stay “in the loop” with BEACON.

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Education opportunities with BEACON

Use this thread to announce BEACON affiliated classes/seminars and other educational opportunities available to IBESTians.

  • CSE 891, Intro to Computational Science for (Evolutionary) Biologists
    http://ged.msu.edu/courses/2011-fall-cse-891/Tu/Th, 2:20-3:40pm Eastern.
    3 credit hours.

    Instructor: C. Titus Brown, ctb@msu.edu

    This course will run from 9/1/11 – 12/8/11 (the Michigan State schedule) and will be offered by videoconference at UW Seattle, U Idaho, and UT Austin as part of the BEACON Center collaboration. Please, no auditing.

    MSU location: BEACON conference room, BPS 1455 A.

  • OL890-002. Evolutionary Biology for Non-life ScientistsTu/Th, 12:40-2:00 (EST)
    3 credit hours

    Instructor: Alex Shingleton, shingle9@msu.edu

    The purpose of the course is to provide you with a working understanding of biological evolution so that you will be able to form productive collaborations with evolutionary biologists. This means that you will need to know much more than just the ‘facts’ of evolutionary biology – you will need to be able to ‘think’ like an evolutionary biologist. Life-scientists in general, and evolutionary biologists specifically, have a particular way of looking at the world, a perspective that may seem unfamiliar, unusual or even wrong to those outside of science. The overall goal of the course is for you to begin to view the world from this perspective.

    This course will run from 9/1/11 – 12/8/11 (the Michigan State schedule) and will be offered by videoconference at UW Seattle, U Idaho, and UT Austin as part of the BEACON Center collaboration.

    MSU Location: BEACON classroom, 1440 BPS

    If you are not at MSU and interested in this course please email shingle9@msu.edu to confirm your enrollment. MSU students need to enroll by emailing craftl@cns.msu with your name and PID.

    The syllabus to the course can be found at www.msu.edu/~shingle9/Syllabus.htm.

  • The genetic architecture of multidimensional adaptation and speciationGraduate BEACON Course at MSU and U Idaho
    MSU Zol 895: Graduate seminar & UI 504: Patterns of Diversity
    Jenny Boughman & Bree Rosenblum
    1 credit, Fall 2011

    Divergent natural selection is a central process leading to adaptation and speciation in the wild. Generally, studies focus on single traits with adaptive value in novel environments. However, selection in novel environments may often be multidimensional – acting on many traits simultaneously – and this may be necessary for adaptation to novel environments and for speciation to occur. The dimensionality of selection has far-reaching implications for linking genotype to phenotype and phenotype to fitness. Recently, studies have identified the genetic basis of individual adaptive traits in natural populations and we are beginning to understand the genetic architecture of such traits. However, little is known about the genetic architecture of multidimensional adaptation and how that genetic architecture may influence evolutionary change. This cross-institution graduate seminar will explore these topics. A primary objective will be to write a joint review article synthesizing existing data and theoretical studies. We will consider published studies to develop expectations for the genetic architecture of multidimensional adaptation and also suggest research directions in systems that could lend additional insight.

    Graduate students and postdocs are invited to participate. Not all participants need contribute to the review, but those who do so substantially will be co-authors. The class will begin early September.

    Contact Jenny boughman@msu.edu or Bree rosenblum@uidaho.edu for information, and to sign up.

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Summary of 2011 BEACON Congress

I (James) recently returned from the annual BEACON Congress at MSU. Rather than try to summarize the meeting, here are some ideas/announcements specifically for our IBEST/BEACON group.

  • The process for requesting BEACON funding for next academic year will begin soon. It will be largely like it was last time. However, this time there will be more emphasis on whether funding is necessary for a continuation of an existing project, the progress of currently funded projects, and the reasonableness of the proposed budget. Here are some tips, to increase your chances of funding in the next round:
    • Have a real collaboration with another BEACON institution (not necessarily funding, but genuine intellectual cross-talk)
    • Have a moderate budget.
    • participate. Present at Friday meetings (faculty and students), attend Friday meetings, Update your beacon “outputs”
    • cite BEACON on relevant publications
    • update your BEACON outputs
    • Did I mention: be sure to update your beacon outputs
  • I want to increase our sense of participation for IBESTians. To that end, I hope to provide refreshments at the Friday meetings. Also, I would like for IBEST/BEACON faculty to meet socially from time to time. This could be at IBEST lunch, or after work offsite. Please let me know if you have ideas. I am usually not a social person, so I can use any help.
  • Remember: We have some discretionary funds for good BEACON-related ideas. We can bring BEACON collaborators and students here for visits, send people off campus, help students and postdocs attend conferences, etc. “etc.” means: “if you have a good idea, tell me.”The external advisory board at BEACON gave us very high marks.

IBEST came up as a mature example of where BEACON is going, several times. I hope we can continue to, ahem, shine the evolution light.

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How to sign up for a BEACON Friday talk

(from Danielle)

1. Go to the BEACON website (www.beacon-center.org)

2. Click on “BEACON Events” in the menu bar

3. Below the calendar is a link to the scheduling spreadsheet – click it!

4. Look over the available dates and decide which one you want

5. Email the appropriate thrust group leader(s):
TG1: Tom Schmidt and Titus Brown
TG2: Rob Pennock and Kay Holekamp
TG3: Fred Dyer and Phil McKinley

That’s it!

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Linking NIH pubs to grants

Here is an interesting description of how NIH maps publications to grants. Good reading for people who have either. :)

http://nexus.od.nih.gov/all/2011/05/18/mapping-publications-to-grants/

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Jack is talking at BEACON this Friday (6/30)

Jack will be presenting work on his beacon project about genomic fingerprints of speciation in the presence of gene flow. Come ask him hard questions!

We meet at 12:30, every Friday, in LSS 144.

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